Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OGN42849.1 | OGN43170.1 | A2623_08715 | A2623_11690 | Pyruvate dehydrogenase complex E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
OGN43169.1 | OGN43170.1 | A2623_11685 | A2623_11690 | Polynucleotide kinase-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
OGN43170.1 | OGN42849.1 | A2623_11690 | A2623_08715 | 3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate dehydrogenase complex E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.418 |
OGN43170.1 | OGN43169.1 | A2623_11690 | A2623_11685 | 3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polynucleotide kinase-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
OGN43170.1 | OGN43730.1 | A2623_11690 | A2623_12430 | 3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology. | FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.419 |
OGN43170.1 | cysC | A2623_11690 | A2623_04950 | 3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.718 |
OGN43730.1 | OGN43170.1 | A2623_12430 | A2623_11690 | FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.419 |
cysC | OGN43170.1 | A2623_04950 | A2623_11690 | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 3' terminal RNA ribose 2'-O-methyltransferase Hen1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.718 |