STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGN43725.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (1006 aa)    
Predicted Functional Partners:
OGN43724.1
Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.890
OGN43726.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.811
OGN43840.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.654
OGN42566.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.627
OGN43205.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.604
OGN43605.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.591
OGN45234.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.590
OGN43259.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
OGN41848.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.530
OGN45233.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
Your Current Organism:
Caulobacterales bacterium RIFCSPHIGHO201FULL7019
NCBI taxonomy Id: 1797585
Other names: C. bacterium RIFCSPHIGHO2_01_FULL_70_19, Caulobacterales bacterium RIFCSPHIGHO2_01_FULL_70_19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.