STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY19192.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)    
Predicted Functional Partners:
OGY18982.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
OGY19200.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.941
OGY17918.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.938
OGY17003.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.931
A2784_00885
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
 
 0.928
OGY17605.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.925
OGY17631.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.925
OGY16307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.891
OGY18981.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.880
OGY15674.1
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.877
Your Current Organism:
Chisholmbacteria bacterium RIFCSPHIGHO201FULL4812
NCBI taxonomy Id: 1797589
Other names: C. Chisholmbacteria bacterium RIFCSPHIGHO2_01_FULL_48_12, Candidatus Chisholmbacteria bacterium RIFCSPHIGHO2_01_FULL_48_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.