STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGN68972.1dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)    
Predicted Functional Partners:
OGN68971.1
dTDP-4-dehydrorhamnose reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGN68970.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
OGN69346.1
Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
OGN69733.1
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.951
OGN70710.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.800
OGN68973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
OGN69252.1
3-demethylubiquinone-9 3-O-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.702
OGN70639.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
  0.641
OGN68953.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.585
OGN70380.1
Protein CapI; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.566
Your Current Organism:
Chlamydiae bacterium RIFCSPLOWO212FULL4520
NCBI taxonomy Id: 1797610
Other names: C. bacterium RIFCSPLOWO2_12_FULL_45_20, Chlamydiae bacterium RIFCSPLOWO2_12_FULL_45_20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.