STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGN96018.1Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)    
Predicted Functional Partners:
OGN96017.1
Redox-active disulfide protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.949
OGN96010.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.680
OGN96019.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.666
OGN96041.1
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.658
OGN96015.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.601
OGN96016.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.601
OGN96014.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.581
OGN97658.1
3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.565
OGN96013.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.538
OGN96020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.445
Your Current Organism:
Chloroflexi bacterium RBG135136
NCBI taxonomy Id: 1797625
Other names: C. bacterium RBG_13_51_36, Chloroflexi bacterium RBG_13_51_36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.