STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGO55399.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)    
Predicted Functional Partners:
OGO55400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.782
OGO55086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.762
OGO54764.1
Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.
    
 0.617
OGO55408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.609
OGO55401.1
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SEDS family.
       0.512
OGO55402.1
Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.512
OGO55403.1
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.512
OGO53089.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.506
OGO54167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.421
Your Current Organism:
Chloroflexi bacterium RBG167013
NCBI taxonomy Id: 1797662
Other names: C. bacterium RBG_16_70_13, Chloroflexi bacterium RBG_16_70_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.