STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A2Z45_06230Hypothetical protein; Too many ambiguous residues; incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (308 aa)    
Predicted Functional Partners:
OGO62719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.931
OGO62721.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.930
A2Z45_07955
Sugar ABC transporter substrate-binding protein; Incomplete; too short partial abutting assembly gap; missing start and stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.924
OGO65975.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.892
OGO65976.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.768
OGO65282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.752
OGO66556.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.627
OGO62820.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.618
OGO65283.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.592
OGO65284.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.584
Your Current Organism:
Chloroflexi bacterium RBG19FTCOMBO5516
NCBI taxonomy Id: 1797669
Other names: C. bacterium RBG_19FT_COMBO_55_16, Chloroflexi bacterium RBG_19FT_COMBO_55_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.