STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3H36_04630Anthranilate phosphoribosyltransferase; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family. (287 aa)    
Predicted Functional Partners:
A3H36_04620
Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
 
 0.999
OGO68361.1
Tryptophan synthase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the TrpA family.
 
 
 0.998
OGO69944.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.661
OGO70282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the HisA/HisF family.
  
 
 0.633
OGO70054.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.633
OGO71698.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.619
A3H36_02920
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.599
OGO71844.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.599
OGO68362.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
Your Current Organism:
Chloroflexi bacterium RIFCSPLOWO202FULL7116
NCBI taxonomy Id: 1797672
Other names: C. bacterium RIFCSPLOWO2_02_FULL_71_16, Chloroflexi bacterium RIFCSPLOWO2_02_FULL_71_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.