STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY59596.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (436 aa)    
Predicted Functional Partners:
OGY59597.1
DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.804
OGY59594.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGY59595.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGY59995.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.762
OGY59887.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.658
OGY58937.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.635
OGY59593.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.629
OGY58837.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase M24B family.
    
  0.555
OGY59631.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.414
OGY59182.1
DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.412
Your Current Organism:
Colwellbacteria bacterium RIFCSPHIGHO212FULL4417
NCBI taxonomy Id: 1797689
Other names: C. Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17, Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.