STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY59246.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (483 aa)    
Predicted Functional Partners:
OGY59247.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.862
OGY58646.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.787
OGY59245.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.589
OGY60270.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.521
OGY59470.1
Hypothetical protein; Involved in DNA repair and RecF pathway recombination.
 
     0.515
OGY58644.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.507
OGY58963.1
methionine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.483
OGY59784.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.464
OGY58645.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.445
OGY58647.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.445
Your Current Organism:
Colwellbacteria bacterium RIFCSPHIGHO212FULL4417
NCBI taxonomy Id: 1797689
Other names: C. Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17, Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.