node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OGD87435.1 | rnc | A3D04_00055 | A3D04_00045 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.798 |
OGD87435.1 | rpsJ | A3D04_00055 | A3D04_02585 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
OGD87435.1 | rpsP | A3D04_00055 | A3D04_00040 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.637 |
OGD88467.1 | OGD88648.1 | A3D04_00975 | A3D04_00255 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.999 |
OGD88467.1 | rpmE | A3D04_00975 | A3D04_01775 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Peptide chain release factor 1; Binds the 23S rRNA. | 0.999 |
OGD88467.1 | rpmH | A3D04_00975 | A3D04_01450 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family. | 0.999 |
OGD88467.1 | rpsJ | A3D04_00975 | A3D04_02585 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
OGD88467.1 | rpsP | A3D04_00975 | A3D04_00040 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
OGD88467.1 | rpsR | A3D04_00975 | A3D04_00265 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
OGD88467.1 | rpsU | A3D04_00975 | A3D04_00465 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 0.999 |
OGD88648.1 | OGD88467.1 | A3D04_00255 | A3D04_00975 | 30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.999 |
OGD88648.1 | rnc | A3D04_00255 | A3D04_00045 | 30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.999 |
OGD88648.1 | rpmE | A3D04_00255 | A3D04_01775 | 30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Peptide chain release factor 1; Binds the 23S rRNA. | 0.999 |
OGD88648.1 | rpmH | A3D04_00255 | A3D04_01450 | 30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family. | 0.999 |
OGD88648.1 | rpsJ | A3D04_00255 | A3D04_02585 | 30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
OGD88648.1 | rpsP | A3D04_00255 | A3D04_00040 | 30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
OGD88648.1 | rpsR | A3D04_00255 | A3D04_00265 | 30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
OGD88648.1 | rpsU | A3D04_00255 | A3D04_00465 | 30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 0.999 |
gltX | rpsJ | A3D04_00625 | A3D04_02585 | glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
rnc | OGD87435.1 | A3D04_00045 | A3D04_00055 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.798 |