STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGP11565.1Electron transporter RnfC; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)    
Predicted Functional Partners:
OGP11580.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGP11581.1
Electron transporter RnfD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
OGP11564.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
OGP11563.1
Electron transport complex subunit RsxE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
OGP11562.1
Electron transport complex subunit RsxA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
OGP07645.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.942
OGP12181.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.802
OGP07877.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.773
OGP10519.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.773
A2Z89_06025
Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.773
Your Current Organism:
Deltaproteobacteria bacterium GWA24319
NCBI taxonomy Id: 1797804
Other names: D. bacterium GWA2_43_19, Deltaproteobacteria bacterium GWA2_43_19
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.