STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGP08757.1Pyridoxine 5'-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)    
Predicted Functional Partners:
OGP12234.1
4-hydroxythreonine-4-phosphate dehydrogenase PdxA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.946
OGP08758.1
Phosphoglucosamine mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
OGP12153.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.798
OGP11622.1
1-deoxy-D-xylulose-5-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.777
OGP11692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.714
OGP08760.1
TIGR00159 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
OGP08756.1
Holo-[acyl-carrier-protein] synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.637
OGP08759.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.629
OGP11726.1
Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.588
OGP08780.1
Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.582
Your Current Organism:
Deltaproteobacteria bacterium GWA24319
NCBI taxonomy Id: 1797804
Other names: D. bacterium GWA2_43_19, Deltaproteobacteria bacterium GWA2_43_19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.