STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYK98653.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (228 aa)    
Predicted Functional Partners:
KYK98654.1
Voltage-gated chloride channel; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
KYK98506.1
Uroporphyrinogen decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.614
KYK97559.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  
 0.510
KYK98652.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.506
KYK98655.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.482
KYK98390.1
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.443
Your Current Organism:
Deltaproteobacteria bacterium GWC25546
NCBI taxonomy Id: 1797818
Other names: D. bacterium GWC2_55_46, Deltaproteobacteria bacterium GWC2_55_46
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.