STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGP86996.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (68 aa)    
Predicted Functional Partners:
OGP86997.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OGP86998.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.515
OGP86999.1
MazF family transcriptional regulator; Toxic component of a type II toxin-antitoxin (TA) system.
       0.515
A2Y95_08005
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.424
OGP86995.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.424
Your Current Organism:
Deltaproteobacteria bacterium RBG136510
NCBI taxonomy Id: 1797835
Other names: D. bacterium RBG_13_65_10, Deltaproteobacteria bacterium RBG_13_65_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.