STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGP77799.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (251 aa)    
Predicted Functional Partners:
OGP77796.1
Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
OGP77821.1
Cytochrome c oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
OGP77798.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.995
OGP77795.1
Cytochrome c oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
A2Z26_06005
Bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; Metagenomic; derived from metagenome: subsurface metagenome.
 
 0.871
OGP78161.1
Cytochrome-c oxidase, cbb3-type subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.836
OGP77797.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.762
OGP77794.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.739
OGP78034.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.677
OGP79924.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.677
Your Current Organism:
Deltaproteobacteria bacterium RBG166615
NCBI taxonomy Id: 1797847
Other names: D. bacterium RBG_16_66_15, Deltaproteobacteria bacterium RBG_16_66_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.