STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGP79700.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (302 aa)    
Predicted Functional Partners:
OGP79817.1
Ribosome silencing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.908
OGP79823.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.904
OGP77950.1
50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.900
OGP77912.1
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.893
OGP77967.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.888
OGP77958.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.880
OGP77940.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.878
OGP77949.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.878
OGP79653.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.851
OGP77392.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.777
Your Current Organism:
Deltaproteobacteria bacterium RBG166615
NCBI taxonomy Id: 1797847
Other names: D. bacterium RBG_16_66_15, Deltaproteobacteria bacterium RBG_16_66_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.