STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGQ58488.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (358 aa)    
Predicted Functional Partners:
OGQ56756.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.968
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 
 0.911
OGQ57519.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.610
tatA
Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.610
OGQ57431.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.589
OGQ55774.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.570
OGQ56220.1
5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.536
OGQ58489.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.518
OGQ58518.1
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
OGQ58490.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.486
Your Current Organism:
Deltaproteobacteria bacterium RIFCSPLOWO202FULL5016
NCBI taxonomy Id: 1797881
Other names: D. bacterium RIFCSPLOWO2_02_FULL_50_16, Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_50_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.