STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR18508.1Glycosyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (427 aa)    
Predicted Functional Partners:
OGR17835.1
Colanic acid biosynthesis glycosyltransferase WcaL; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.830
OGR15648.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.801
OGR16192.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.794
A2X81_20075
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.781
OGR16708.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.766
OGR15969.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.766
OGR17500.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.759
A2X81_12235
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
  
     0.636
OGR18513.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.603
OGR16190.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.579
Your Current Organism:
Desulfobacterales bacterium GWB25626
NCBI taxonomy Id: 1797913
Other names: D. bacterium GWB2_56_26, Desulfobacterales bacterium GWB2_56_26
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