STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR19108.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (647 aa)    
Predicted Functional Partners:
OGR19109.1
acetyl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.992
OGR19112.1
acetyl-CoA decarbonylase/synthase complex subunit gamma; Part of a complex that catalyzes the cleavage of acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.990
OGR19128.1
Fe-S cluster protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.929
OGR18803.1
Fe-S cluster protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.919
OGR18530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.882
OGR19111.1
CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.865
OGR19113.1
Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.864
OGR19119.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
   0.845
OGR19110.1
Carbon-monoxide dehydrogenase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.839
OGR18802.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.815
Your Current Organism:
Desulfobacterales bacterium GWB25626
NCBI taxonomy Id: 1797913
Other names: D. bacterium GWB2_56_26, Desulfobacterales bacterium GWB2_56_26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.