Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A2X81_20425 | OGR19488.1 | A2X81_20425 | A2X81_20435 | 4-hydroxybenzoate decarboxylase; Metagenomic; derived from metagenome: subsurface metagenome. | DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
| A2X81_20425 | ku | A2X81_20425 | A2X81_20430 | 4-hydroxybenzoate decarboxylase; Metagenomic; derived from metagenome: subsurface metagenome. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.541 |
| OGR16345.1 | OGR19488.1 | A2X81_08970 | A2X81_20435 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.617 |
| OGR16345.1 | ku | A2X81_08970 | A2X81_20430 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.421 |
| OGR17453.1 | OGR19488.1 | A2X81_02160 | A2X81_20435 | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
| OGR17453.1 | ku | A2X81_02160 | A2X81_20430 | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.548 |
| OGR19488.1 | A2X81_20425 | A2X81_20435 | A2X81_20425 | DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-hydroxybenzoate decarboxylase; Metagenomic; derived from metagenome: subsurface metagenome. | 0.487 |
| OGR19488.1 | OGR16345.1 | A2X81_20435 | A2X81_08970 | DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.617 |
| OGR19488.1 | OGR17453.1 | A2X81_20435 | A2X81_02160 | DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology. | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
| OGR19488.1 | OGR19489.1 | A2X81_20435 | A2X81_20440 | DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
| OGR19488.1 | ku | A2X81_20435 | A2X81_20430 | DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.994 |
| OGR19489.1 | OGR19488.1 | A2X81_20440 | A2X81_20435 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
| OGR19489.1 | ku | A2X81_20440 | A2X81_20430 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.464 |
| ku | A2X81_20425 | A2X81_20430 | A2X81_20425 | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 4-hydroxybenzoate decarboxylase; Metagenomic; derived from metagenome: subsurface metagenome. | 0.541 |
| ku | OGR16345.1 | A2X81_20430 | A2X81_08970 | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.421 |
| ku | OGR17453.1 | A2X81_20430 | A2X81_02160 | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
| ku | OGR19488.1 | A2X81_20430 | A2X81_20435 | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| ku | OGR19489.1 | A2X81_20430 | A2X81_20440 | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.464 |