STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A2051_08100Formate dehydrogenase; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)    
Predicted Functional Partners:
OGR36639.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
OGR36640.1
Formate dehydrogenase-N subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.967
OGR39265.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.965
OGR39267.1
Hypothetical protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
  
 0.899
OGR34584.1
Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.847
OGR35465.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.833
OGR34581.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.828
OGR36962.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.823
OGR34582.1
Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.814
OGR40434.1
Hypothetical protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
  
 0.809
Your Current Organism:
Desulfovibrionales bacterium GWA2659
NCBI taxonomy Id: 1797915
Other names: D. bacterium GWA2_65_9, Desulfovibrionales bacterium GWA2_65_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.