STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR34521.1acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (700 aa)    
Predicted Functional Partners:
OGR38790.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.724
A2051_10765
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.645
OGR35464.1
Citrate (Si)-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.
    
 0.634
ackA
Phosphate acetyltransferase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
    
 0.634
OGR39342.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.612
OGR36599.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.608
OGR36509.1
Acetoin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.595
OGR36505.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.586
OGR40351.1
8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.575
OGR35971.1
Indolepyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.554
Your Current Organism:
Desulfovibrionales bacterium GWA2659
NCBI taxonomy Id: 1797915
Other names: D. bacterium GWA2_65_9, Desulfovibrionales bacterium GWA2_65_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.