STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR37863.1Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)    
Predicted Functional Partners:
OGR37858.1
Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
OGR37859.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.959
OGR34350.1
General secretion pathway protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.880
OGR40254.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.866
OGR34351.1
General secretion pathway protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.793
OGR35511.1
General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.740
OGR39480.1
Hypothetical protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.729
OGR34348.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.565
OGR34352.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.554
OGR35512.1
Type II and III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.505
Your Current Organism:
Desulfovibrionales bacterium GWA2659
NCBI taxonomy Id: 1797915
Other names: D. bacterium GWA2_65_9, Desulfovibrionales bacterium GWA2_65_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.