STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR48107.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)    
Predicted Functional Partners:
OGR48079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.757
OGR48449.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.681
OGR50276.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.666
OGR47007.1
Methionine sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.637
OGR49996.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.595
OGR50275.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.594
OGR45671.1
4-aminobutyrate--2-oxoglutarate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.593
OGR47874.1
cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.583
OGR50267.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.576
OGR50216.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.573
Your Current Organism:
Elusimicrobia bacterium GWA25134
NCBI taxonomy Id: 1797921
Other names: E. bacterium GWA2_51_34, Elusimicrobia bacterium GWA2_51_34
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.