STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR48610.1Secondary thiamine-phosphate synthase enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)    
Predicted Functional Partners:
OGR48611.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
OGR50274.1
Thiamine-phosphate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.692
OGR49102.1
Ribosome small subunit-dependent GTPase A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.582
OGR48868.1
Ribosome small subunit-dependent GTPase A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.582
OGR48623.1
50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
OGR45755.1
Di-trans,poly-cis-decaprenylcistransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.540
OGR46842.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.420
OGR49289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.420
OGR46229.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.420
Your Current Organism:
Elusimicrobia bacterium GWA25134
NCBI taxonomy Id: 1797921
Other names: E. bacterium GWA2_51_34, Elusimicrobia bacterium GWA2_51_34
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