STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR47529.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)    
Predicted Functional Partners:
OGR49074.1
Uracil phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.943
OGR47114.1
Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.895
OGR49029.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.885
OGR47530.1
Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.786
OGR48870.1
Transaldolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.769
OGR47912.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.751
OGR49067.1
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.736
OGR45758.1
UMP kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.732
OGR48411.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.723
OGR49040.1
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.715
Your Current Organism:
Elusimicrobia bacterium GWA25134
NCBI taxonomy Id: 1797921
Other names: E. bacterium GWA2_51_34, Elusimicrobia bacterium GWA2_51_34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.