STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR49975.1Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (654 aa)    
Predicted Functional Partners:
OGR48870.1
Transaldolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.995
OGR47392.1
Transaldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.913
OGR49067.1
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.898
OGR47114.1
Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.789
OGR45597.1
Fructose-1,6-bisphosphate aldolase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.784
OGR46594.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.724
OGR47112.1
Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.723
OGR50282.1
Ribose-phosphate pyrophosphokinase; Catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.714
OGR48869.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.709
OGR50385.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.698
Your Current Organism:
Elusimicrobia bacterium GWA25134
NCBI taxonomy Id: 1797921
Other names: E. bacterium GWA2_51_34, Elusimicrobia bacterium GWA2_51_34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.