STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR48153.1phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)    
Predicted Functional Partners:
OGR48154.1
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.999
OGR48152.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.895
OGR45960.1
Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.785
OGR48425.1
Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.775
OGR45961.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.741
OGR48151.1
50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.728
OGR50538.1
50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.712
OGR48150.1
Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.698
OGR49568.1
serine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.685
OGR46759.1
threonine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.662
Your Current Organism:
Elusimicrobia bacterium GWA25134
NCBI taxonomy Id: 1797921
Other names: E. bacterium GWA2_51_34, Elusimicrobia bacterium GWA2_51_34
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