STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR47191.1glutamine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)    
Predicted Functional Partners:
OGR50542.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.981
OGR50530.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.979
OGR50531.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.978
OGR48559.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.976
OGR50529.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.971
A2X33_11500
30S ribosomal protein S3; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.970
OGR50534.1
50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.969
OGR50543.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.969
OGR50533.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.962
OGR45965.1
50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.958
Your Current Organism:
Elusimicrobia bacterium GWA25134
NCBI taxonomy Id: 1797921
Other names: E. bacterium GWA2_51_34, Elusimicrobia bacterium GWA2_51_34
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