STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR50554.130S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)    
Predicted Functional Partners:
OGR50556.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OGR50557.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
OGR45961.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OGR50555.1
30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OGR50535.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
OGR50540.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OGR50543.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OGR49069.1
30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.996
OGR47887.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.996
OGR45760.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
Your Current Organism:
Elusimicrobia bacterium GWA25134
NCBI taxonomy Id: 1797921
Other names: E. bacterium GWA2_51_34, Elusimicrobia bacterium GWA2_51_34
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