STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR65128.12-oxoacid ferredoxin oxidoreductase; Catalyzes the coenzyme A-dependent decarboxylation of 2-oxoacids, such as pyruvate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)    
Predicted Functional Partners:
OGR65127.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGR63461.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.998
OGR65716.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OGR63078.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.929
OGR63041.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.808
OGR63080.1
2-oxoacid:ferredoxin oxidoreductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.808
OGR63036.1
ATP citrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.798
OGR64677.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pyruvate kinase family.
   
 0.768
OGR65129.1
Phosphoketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.725
OGR65481.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.698
Your Current Organism:
Elusimicrobia bacterium GWB26322
NCBI taxonomy Id: 1797929
Other names: E. bacterium GWB2_63_22, Elusimicrobia bacterium GWB2_63_22
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