STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR80854.150S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)    
Predicted Functional Partners:
OGR80097.1
glutamate--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
OGR81302.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGR80850.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGR80885.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGR80851.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGR80886.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGR80852.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGR80853.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
A3B80_04260
30S ribosomal protein S3; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGR80856.1
50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
Your Current Organism:
Elusimicrobia bacterium RIFCSPHIGHO202FULL3936
NCBI taxonomy Id: 1797942
Other names: E. bacterium RIFCSPHIGHO2_02_FULL_39_36, Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_39_36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.