node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OGR95413.1 | OGR96559.1 | A2902_07410 | A2902_03280 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | 0.993 |
OGR95413.1 | OGR97359.1 | A2902_07410 | A2902_00435 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.987 |
OGR95413.1 | rplC | A2902_07410 | A2902_07485 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
OGR95413.1 | rplD | A2902_07410 | A2902_07480 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.994 |
OGR95413.1 | rplM | A2902_07410 | A2902_00430 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
OGR95413.1 | rplO | A2902_07410 | A2902_07395 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
OGR95413.1 | rplP | A2902_07410 | A2902_07450 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
OGR95413.1 | rplQ | A2902_07410 | A2902_03270 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
OGR95413.1 | rpoA | A2902_07410 | A2902_03275 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
OGR95413.1 | rpsP | A2902_07410 | A2902_05325 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | 30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.992 |
OGR96559.1 | OGR95413.1 | A2902_03280 | A2902_07410 | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. | 0.993 |
OGR96559.1 | OGR97359.1 | A2902_03280 | A2902_00435 | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.993 |
OGR96559.1 | rplC | A2902_03280 | A2902_07485 | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.992 |
OGR96559.1 | rplD | A2902_03280 | A2902_07480 | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
OGR96559.1 | rplM | A2902_03280 | A2902_00430 | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.992 |
OGR96559.1 | rplO | A2902_03280 | A2902_07395 | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.992 |
OGR96559.1 | rplP | A2902_03280 | A2902_07450 | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.994 |
OGR96559.1 | rplQ | A2902_03280 | A2902_03270 | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
OGR96559.1 | rpoA | A2902_03280 | A2902_03275 | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
OGR96559.1 | rpsP | A2902_03280 | A2902_05325 | 30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS4 family. | 30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.991 |