STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGR97470.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (411 aa)    
Predicted Functional Partners:
OGR97467.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.964
OGR97468.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.948
OGR97469.1
Cytochrome bc complex cytochrome b subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.922
OGR97462.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.846
A2902_06920
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.799
OGR97821.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.719
OGR97471.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.717
OGR97466.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
OGR97463.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.679
OGR97472.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.678
Your Current Organism:
Elusimicrobia bacterium RIFCSPLOWO201FULL6413
NCBI taxonomy Id: 1797948
Other names: E. bacterium RIFCSPLOWO2_01_FULL_64_13, Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_64_13
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