STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A2234_10815Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (197 aa)    
Predicted Functional Partners:
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
 
 0.994
OGS16145.1
Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
A2234_08370
8-amino-7-oxononanoate synthase; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.944
OGS11986.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.936
A2234_10795
3-deoxy-D-manno-octulosonate cytidylyltransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.819
OGS12786.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
  0.767
OGS13030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.763
OGS17269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
   0.725
OGS15454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.722
OGS13190.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.
     
 0.708
Your Current Organism:
Elusimicrobia bacterium RIFOXYA2FULL588
NCBI taxonomy Id: 1797962
Other names: E. bacterium RIFOXYA2_FULL_58_8, Elusimicrobia bacterium RIFOXYA2_FULL_58_8
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