STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX07885.12-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)    
Predicted Functional Partners:
ORX07210.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.962
ORX00088.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.891
ORX01148.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.886
ORX01330.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.842
ORX00149.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.842
ORX03643.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.840
ORX06653.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.825
ORX07881.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.812
ORX07309.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.807
ORX07884.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.802
Your Current Organism:
Mycolicibacillus trivialis
NCBI taxonomy Id: 1798
Other names: ATCC 23292, CCUG 42431, DSM 44153, M. trivialis, Mycobacterium triviale
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