STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX05660.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa)    
Predicted Functional Partners:
ORX05661.1
Glutathione-dependent reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.857
ORX05057.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.705
ORX04651.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.705
ORX08499.1
Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.692
ORX08500.1
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.662
ORX05659.1
Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.604
nuoI
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  0.575
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  0.548
ORX07309.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.546
ORX06653.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.522
Your Current Organism:
Mycolicibacillus trivialis
NCBI taxonomy Id: 1798
Other names: ATCC 23292, CCUG 42431, DSM 44153, M. trivialis, Mycobacterium triviale
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