Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
ORX05769.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)    
Predicted Functional Partners:
ORX05770.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.998
ORX06136.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.938
ORX05675.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.934
ORX07057.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.928
ORX05725.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.905
ORX06774.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.887
ORX07070.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.869
ORX01398.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.868
ORX06135.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.861
AWC30_17015
Transposase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.828
Your Current Organism:
Mycolicibacillus trivialis
NCBI taxonomy Id: 1798
Other names: ATCC 23292, CCUG 42431, DSM 44153, M. trivialis, Mycobacterium triviale
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