STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX05821.1Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)    
Predicted Functional Partners:
ORX01393.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.888
ORX08173.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.640
ORX02167.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.640
ORX07286.1
Growth inhibitor PemK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
ORX08427.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
ORX05536.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.542
ORW99432.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.533
ORX05884.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.524
ORW99446.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
ORX00545.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
Your Current Organism:
Mycolicibacillus trivialis
NCBI taxonomy Id: 1798
Other names: ATCC 23292, CCUG 42431, DSM 44153, M. trivialis, Mycobacterium triviale
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