STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX05859.1Geraniol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)    
Predicted Functional Partners:
ORX01289.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.768
ORX05525.1
Glutathione-dependent formaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.660
ORX01664.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.609
ORX06636.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.597
dhmA
Haloalkane dehalogenase; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons.
    
  0.501
ORX08176.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.488
ORX06656.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.488
ORX06725.1
Diacylglycerol acyltransferase/mycolyltransferase Ag85A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.488
ORX06214.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.488
ORX03163.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.488
Your Current Organism:
Mycolicibacillus trivialis
NCBI taxonomy Id: 1798
Other names: ATCC 23292, CCUG 42431, DSM 44153, M. trivialis, Mycobacterium triviale
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