STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX01410.1stearoyl-CoA 9-desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)    
Predicted Functional Partners:
ORX01411.1
stearoyl-CoA 9-desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
ORX01661.1
Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
ORX07309.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.939
ORX05669.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.896
ORX01662.1
Ferredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.885
ORX08498.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.875
ORX08002.1
Iron-sulfur cluster assembly scaffold protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.864
ORX07542.1
NADPH-dependent 2,4-dienoyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.863
ORX05805.1
acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.848
ORX03204.1
acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.848
Your Current Organism:
Mycolicibacillus trivialis
NCBI taxonomy Id: 1798
Other names: ATCC 23292, CCUG 42431, DSM 44153, M. trivialis, Mycobacterium triviale
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