STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX01035.1Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily. (285 aa)    
Predicted Functional Partners:
ORX04146.1
Inositol-3-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.955
ORX08067.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.886
ORW99396.1
3'(2'),5'-bisphosphate nucleotidase CysQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.766
ORX07967.1
rRNA cytosine-C5-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.686
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.685
nusG
Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination.
   
 
 0.683
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.683
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.683
ORX01036.1
Polyphosphate glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
 
 0.639
Your Current Organism:
Mycolicibacillus trivialis
NCBI taxonomy Id: 1798
Other names: ATCC 23292, CCUG 42431, DSM 44153, M. trivialis, Mycobacterium triviale
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