STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX00174.1Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (862 aa)    
Predicted Functional Partners:
ORX00175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.931
ORX01148.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.858
ORX03643.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.851
ORX01402.1
Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.850
ORX00198.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.845
ORX00199.1
Nitrite reductase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.844
ORX00149.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.843
ORX03642.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.839
ORX00121.1
Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.808
narY
Nitrate reductase; With NarZV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.790
Your Current Organism:
Mycolicibacillus trivialis
NCBI taxonomy Id: 1798
Other names: ATCC 23292, CCUG 42431, DSM 44153, M. trivialis, Mycobacterium triviale
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