STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF42320.1Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. (778 aa)    
Predicted Functional Partners:
OGF42332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.978
OGF41977.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.864
OGF42319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.771
OGF42322.1
Crossover junction endodeoxyribonuclease RuvC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.709
OGF42324.1
Holliday junction DNA helicase RuvB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.573
OGF44161.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
  0.548
OGF42321.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
Your Current Organism:
Falkowbacteria bacterium RIFOXYD2FULL3916
NCBI taxonomy Id: 1798009
Other names: C. Falkowbacteria bacterium RIFOXYD2_FULL_39_16, Candidatus Falkowbacteria bacterium RIFOXYD2_FULL_39_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.