STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGS72069.1DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)    
Predicted Functional Partners:
OGS73304.1
DNA topoisomerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
OGS72071.1
Arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.712
OGS69893.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
OGS81574.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
OGS73807.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
OGS70323.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
OGS75700.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
OGS72070.1
Deoxyhypusine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.633
OGS80872.1
S-adenosyl-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
A3G95_05530
RNA-splicing ligase RtcB; Metagenomic; derived from metagenome: subsurface metagenome.
  
     0.562
Your Current Organism:
Flavobacteria bacterium RIFCSPLOWO212FULL317
NCBI taxonomy Id: 1798015
Other names: F. bacterium RIFCSPLOWO2_12_FULL_31_7, Flavobacteria bacterium RIFCSPLOWO2_12_FULL_31_7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.