STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGS78553.1Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)    
Predicted Functional Partners:
OGS79203.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.923
OGS79732.1
ATP-dependent RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.923
OGS78583.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.714
OGS75874.1
Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.695
OGS77301.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.661
OGS77296.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.649
FusA
Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.645
OGS76661.1
50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.640
OGS78756.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.611
OGS77278.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.589
Your Current Organism:
Fluviicola riflensis
NCBI taxonomy Id: 1798018
Other names: C. Fluviicola riflensis, Candidatus Fluviicola riflensis, Fluviicola sp. RIFCSPHIGHO2_02_FULL_43_260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.