STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB89647.1Recombination protein RecT. (266 aa)    
Predicted Functional Partners:
SCB89606.1
Exodeoxyribonuclease VIII.
 
  
 0.947
SCB89581.1
Hypothetical protein.
       0.773
SCB89810.1
Single-strand binding protein.
     
 0.484
SCB89542.1
Hypothetical protein.
       0.481
SCB89675.1
Hypothetical protein.
       0.453
SCB89704.1
Hypothetical protein.
       0.453
SCB89733.1
Hypothetical protein.
       0.453
SCB89759.1
Hypothetical protein.
       0.453
SCB89788.1
Hypothetical protein.
       0.453
Your Current Organism:
Gilliamella bombicola
NCBI taxonomy Id: 1798182
Other names: DSM 104085, G. bombicola, Gilliamella bombicola Praet et al. 2017, Gilliamella sp. R-53248, LMG 28359, LMG:28359, strain R-53248
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.