STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB80895.1Pilus assembly protein CpaC; Belongs to the bacterial secretin family. (476 aa)    
Predicted Functional Partners:
SCB80991.1
Pilus assembly protein CpaF.
  
 0.966
SCB80917.1
Pilus assembly protein CpaB.
  
  
 0.955
SCB80971.1
Tight adherence protein B.
 
  
 0.952
SCB80951.1
Tight adherence protein C.
 
  
 0.939
SCB80934.1
Tight adherence protein D.
 
  
 0.897
SCB80882.1
Pilus assembly protein CpaE.
  
  
 0.893
SCB80866.1
Tight adherence protein E.
  
  
 0.743
SCB80846.1
Putative tight adherence pilin protein F.
     
 0.667
SCB81013.1
Pilus assembly protein Flp/PilA.
  
  
 0.648
SCB80827.1
Tight adherence protein G.
       0.562
Your Current Organism:
Gilliamella intestini
NCBI taxonomy Id: 1798183
Other names: DSM 104029, G. intestini, Gilliamella intestini Praet et al. 2017, Gilliamella sp. R-53144, LMG 28358, LMG:28358, strain R-53144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.