STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCC07435.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
SCC07454.1
Hypothetical protein.
       0.773
SCC07361.1
Protein of unknown function.
       0.516
SCC07378.1
Hypothetical protein.
       0.516
SCC07398.1
Hypothetical protein.
      
0.516
SCC07417.1
Hypothetical protein.
       0.516
SCC07324.1
Hypothetical protein.
       0.449
SCC07344.1
Hypothetical protein.
       0.449
SCC07304.1
Rhs element Vgr protein.
       0.431
Your Current Organism:
Gilliamella intestini
NCBI taxonomy Id: 1798183
Other names: DSM 104029, G. intestini, Gilliamella intestini Praet et al. 2017, Gilliamella sp. R-53144, LMG 28358, LMG:28358, strain R-53144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.